Dynamic programming (DP) algorithms have become indispensable in computational biology, addressing problems that range from sequence alignment and phylogenetic inference to RNA secondary structure ...

We propose a dynamic programming algorithm for the one-dimensional Fused Lasso Signal Approximator (FLSA). The proposed algorithm has a linear running time in the worst case. A similar approach is ...

In this paper we develop a discretized version of the dynamic programming algorithm and study its convergence and stability properties. We show that the computed value function converges quadratically ...

This is an advanced undergraduate course on algorithms. This course examines such topics as greedy algorithms, dynamic programming, graph algorithms, string processing, and algorithms for ...